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| Scientific articles |
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1 |
Jones, B.N., Lewis, R.V., Pääbo,
S., Kojima, K., Kimura, S., and Stein, S.: Effects
of flowrate and eluant composition on the high performance,
liquid chromatography of proteins. J. Liq. Chrom. 3(9):
1373-1381 (1980). |
|
2 |
Jones, B.N., Pääbo, S., and Stein, S.:
Amino acid analysis and enzymatic sequence determination
of peptides by an improved o-phtaldialdehyde precolumn
labeling procedure. J. Liq. Chrom. 4(4): 565-586 (1981). |
|
3 |
Pääbo, S., Lundqvist, G., Peterson, B.,
and Andersson, A.: Hormone content of pancreatic islets
subjected to different in vitro and in vivo functional
demands. Experentia 37: 1213-1214 (1981). |
|
4 |
Kämpe, O., Bellgrau, D., Hammerling, U., Lind,
P., Pääbo, S., Severinsson, L., Peterson,
P.A.: Complex formation between class I transplantation
antigens and a viral glycoprotein. J. Biol. Chem. 258:
10594-10598 (1983). |
|
5 |
Pääbo, S., Weber, F., Kämpe, O.,
Schaffner, W., and Peterson, P.A.: Association between
class I transplantation antigens and a viral membrane
protein synthesized from a mammalian expression vector.
Cell 33: 445-453 (1983). |
|
6 |
Pääbo, S., Kämpe, O., Severinsson,
L., Andersson, M., Fernandez, C., and Peterson, P.A.:
The association between class I transplantation antigens
and an adenovirus membrane protein. Prog. Allergy 36:
114-134 (1984). |
|
7 |
Pääbo, S.: Über den Nachweis von
DNA in altägyptischen Mumien. Das Altertum 30:
213-218 (1984). [pdf] |
|
8 |
Pääbo, S.: Preservation of DNA in ancient
Egyptian mummies. J. Archaeol. Sci. 12: 411-417 (1985). |
|
9 |
Pääbo, S.: Molecular cloning of ancient
Egyptian mummy DNA. Nature 314: 644-645 (1985). [pdf] |
|
10 |
Andersson, M., Pääbo, S., Nilsson, T.,
and Peterson, P.A.: Impaired intracellular transport
of class I MHC antigens as a possible means for adeno-viruses
to evade immune surveillance. Cell 43: 215-222 (1985). |
|
11 |
Pääbo, S., Weber, F., Nilsson, T., Schaffner,
W., and Peterson, P.A.: Structural and functional dissection
of an MHC class I antigen-binding adenovirus glycoprotein.
EMBO J. 5: 1921-1927 (1986). |
|
12 |
Pääbo, S., Nilsson, T., and Peterson,
P.A.: Adenoviruses of subgenera B, C, D, and E modulate
cell-surface expression of MHC class I antigens. Proc.
Natl. Acad. Sci. USA 83: 9665-9669 (1986). |
|
13 |
Pääbo, S.: Molecular genetic investigations
of ancient human remains. Cold Spring Harbor Symp.
Quant. Biol. LI: 441-446 (1986). |
|
14 |
Pääbo, S.: Molecular genetic methods in
archaeology - a prospect. Anthropol. Anzeiger 45: 9-17
(1987). |
|
15 |
Andersson, L., Pääbo, S., and Rask, L.:
Is allograft rejection a clue to the mechanism promoting
MHC polymorphism? Immunol. Today 8: 206-209 (1987). |
|
16 |
Pääbo, S., Bhat, B.H., Wold, W.S.M., and
Peterson, P.A.: A short sequence in the COOH-terminus
makes an adenovirus membrane glycoprotein a resident
of the endoplasmic reticulum. Cell 50: 311-317 (1987). |
|
17 |
Pääbo, S., and Wilson, A.C.: Polymerase
chain reaction revels cloning artefacts. Nature 334:
387-388 (1988). [pdf] |
|
18 |
Pääbo, S., Gifford, J.A., and Wilson,
A.C.: Mitochondrial DNA sequences from a 7000-year-old
brain. Nucl. Acids Res. 16(20): 9775-9787 (1988). [pdf] |
|
19 |
Pääbo, S., Severinsson, L., Andersson,
M., Martens, I., Nilsson, T., and Peterson, P.A.: Adenovirus
proteins and MHC expression. Adv. Cancer Res. 52: 151-163
(1989). |
|
20 |
Ljunggren, H.-G., Pääbo, S., Cochet, M.,
Kling, G., Kourilsky, P., and Kärre, K.: Molecular
analysis of H-2-deficient lymphoma lines. Distinct
defects in biosynthesis and association of MHC class
I heavy chains and ß2- microglobulin observed
in cells with increased sensitivity to NK cell lysis.
J. Immunol. 142: 2911-2917 (1989). |
|
21 |
Pääbo, S.: Ancient DNA; extraction, characterization,
molecular cloning and enzymatic amplification. Proc.
Natl. Acad. Sci. USA 86: 1939-1943 (1989). [pdf] |
|
22 |
Kocher, T.D., Thomas, W.K., Meyer, A., Edwards,
S.V., Pääbo, S., Villablanca, F.X., and Wilson,
A.C.: Dynamics of mitochondrial DNA evolution in animals:
Amplification and sequencing with conserved primers.
Proc. Natl. Acad. Sci. USA 86, 6196-6200 (1989). [pdf] |
|
23 |
Pääbo, S., Higuchi, R.G., and Wilson,
A.C.: Ancient DNA and the poly-merase chain reaction:
The emerging field of molecular archaeology (Minireview).
J. Biol. Chem. 264: 9709-9712 (1989). [pdf] |
|
24 |
Thomas, R.H., Schaffner, W., Wilson, A.C., and Pääbo,
S.: DNA phylogeny of the extinct marsupial wolf. Nature
340: 465-467 (1989). [pdf] |
|
25 |
Pääbo, S., Irwin, D.M., and Wilson, A.C.:
DNA damage promotes jumping between templates during
enzymatic amplification. J. Biol. Chem. 265, 4718-4721
(1990). |
|
26 |
Thomas, W.K., Pääbo, S., Villablanca,
F.X., and Wilson, A.C.: Spatial and temporal continuity
of kangaroo rat populations shown by sequencing mitochondrial
DNA from museum specimens. J. Mol. Evol. 31: 101-112
(1990). |
|
27 |
Thomas, R.H., Pääbo, S., and Wilson, A.C.:
Chance marsupial relationships. Nature 345, 393-394
(1990). |
|
28 |
Pääbo, S., Thomas, W.K., Whitfield, K.M.,
Kumazawa, Y., and Wilson, A.C.: Rearrangements of mitochondrial
transfer RNA genes in marsupials. J. Mol. Evol. 33:
426-430 (1991). |
|
29 |
Ward, R.H., Frazier, B.L., Dew-Jager, K., and Pääbo,
S.: Extensive mitochondrial diversity within a single
Amerindian tribe. Proc. Natl. Acad. Sci. USA 88: 8720-8724
(1991). |
|
30 |
Pääbo, S., and Wilson, A.C.: Miocene DNA
sequences - A dream come true? Current Biol. 1: 45-46
(1991). [pdf] |
|
31 |
Welsh, N., Pääbo, S., and Welsh, M.: Decreased
mitochondrial gene expression in isolated islets of
rats injected neonatally with streptozotocin. Diabetologia
34: 626-631 (1991). |
|
32 |
Sidow, A., Wilson, A.C., and Pääbo, S.:
Bacterial DNA in Clarkia fossils. Phil. Trans. R. Soc.
B. 333: 429-433 (1991). |
|
33 |
Pääbo, S.: Amplifying DNA from Archeological
Remains: A Meeting Report. PCR Methods Applic. 1: 107-110
(1991). |
|
34 |
Cooper, A., Mourer-Chauviré, C., Chambers,
G.K., von Haeseler, A., Wilson, A.C., and Pääbo,
S.: Independent origins of New Zealand moas and kiwis.
Proc. Natl. Acad. Sci. USA 89: 8741-8744 (1992). |
|
35 |
Pääbo, S., Wayne, R., and Thomas, R.:
On the use of museum collections for molecular genetic
studies. Ancient DNA Newsletter 1: 4-5 (1992). |
|
36 |
Höss, M., Kohn, M., Pääbo, S., Knauer,
F., and Schröder, W.: Excrement analysis by PCR.
Nature 359: 199 (1992). |
|
37 |
Goloubinoff, P., Pääbo, S., and Wilson,
A.C.: Evolution of maize inferred from sequence diversitz
of an Adh2 gene segment from archaeological specimens.
Proc. Natl. Acad. Sci. USA 90: 1997-2001 (1993). |
|
38 |
Ward, R.H., Redd, A., Valencia, D., Frazier, B.,
and Pääbo, S.: Genetic and linguistic differentiation
in the Americas. Proc. Natl. Acad. Sci. USA 90: 10663-10667
(1993). |
|
39 |
Janke, A. and Pääbo, S.: Editing of a
tRNA anticodon in marsupial mitochondria changes its
codon recognition. Nucl. Acids Res. 21: 1523-1525 (1993). |
|
40 |
Schliewen, U., Fricke, H., Schartl, M., Epplen,
J.T., and Pääbo, S.: Which home for coelacanth?
Nature 363: 405 (1993). |
|
41 |
Höss, M. and Pääbo, S.: DNA extraction
from Pleistocene bones by a silica-based purification
method. Nucl. Acids Res. 21: 3913-3914 (1993) |
|
42 |
von Haeseler, A., Janke, A., and Pääbo,
S.: Molecular Phylogenetics. Proc. Ger. Zool. Soc.
86.2: 119-129 (1993). |
|
43 |
Pääbo, S.: Ancient DNA. Sci. Am. 269(5):
86-92 (1993). |
|
44 |
Thomas, W.K. and Pääbo, S.: DNA Sequences
from Old Tissue Remains. Meth. Enz. 224: 406-419 (1993). |
|
45 |
Schliewen, U.K., Tautz, D., and Pääbo,
S.: Sympatric speciation suggested by monophyly of
crater lake cichlids. Nature 368: 629-632 (1994). |
|
46 |
Janke, A., Feldmaier-Fuchs, G., Thomas, W.K., von
Haesler, A., and Pääbo, S.: The marsupial
mitochondrial genome and the evolution of placental
mammals. Genetics 137: 243-256 (1994). |
|
47 |
Handt, O., Richards, M., Trommsdorff, M., Kilger,
C., Simanainen, J., Georgiev, O., Bauer, K., Stone,
A., Hedges, R., Schaffner, W., Utermann, G., Sykes,
B., and Pääbo, S.: Molecular genetic analyses
of the Tyrolean Ice Man. Science 264: 1775-1778 (1994). |
|
48 |
Höss, M., Pääbo, S., and Vereshchagin,
N.K.: Mammoth DNA sequences. Nature 370: 333 (1994). [pdf] |
|
49 |
Handt, O., Höss, M., Krings, M., and Pääbo,
S.: Ancient DNA: methodological challenges. Experientia
50: 524-529 (1994). |
|
50 |
Bada, J.L., Wang, X.S., Poinar, H.N., Pääbo,
S., and Poinar, G.O.: Amino acid racemization in amber-entombed
insects: Implications for DNA preservation. Geochimica
et Cosmochimica Acta 58: 3131-3135 (1994). |
|
51 |
Gemmell, N.J., Janke, A., Western, P.S., Watson,
J.M., Pääbo, S., and Marshall Graves, J.A.:
Cloning and characterization of the platypus mitochondrial
genome. J. Mol. Evol. 39: 200-205 (1994). |
|
52 |
Cao, Y., Adachi, J., Janke, A., Pääbo,
S., and Hasegawa, M.: Phylogenetic relationships among
eutherian orders estimated from inferred sequences
of mitochondrial proteins: Instability of a tree based
on a single gene. J. Mol. Evol. 39: 519-527 (1994). |
|
53 |
Pult, I., Sajantila, A., Simanainen, J., Georgiev,
O., Schaffner, W., and Pääbo, S.: Mitochondrial
DNA sequences from Switzerland reveal striking homogeneity
of European populations. Biol. Chem. Hoppe-Seyler 375:
837-840 (1994). [pdf] |
|
54 |
Kohn, M., Knauer, F., Stoffella, A., Schröder,
W., and Pääbo, S.: Conservation genetics
of the European brown bear - a study using excremental
PCR of nuclear and mitochondrial sequences. Mol. Ecol.
4: 95-103 (1995). [pdf] |
|
55 |
Dörner, M. and Pääbo, S.: Nucleotide
sequence of a marsupial LINE-1 element and the evolution
of placental mammals. Mol. Biol. Evol. 12: 944-948
(1995). |
|
56 |
Mörl, M., Dörner, M., and Pääbo,
S.: C to U editing and modifications during the maturation
of the mitochondrial tRNAAsp in marsupials. Nucl. Acids
Res. 23: 3380-3384 (1995). |
|
57 |
Yokobori, S.-I. and Pääbo, S.: Transfer
RNA editing in land snail mitochondria. Proc. Natl.
Acad. Sci. USA 92: 10432-10435 (1995). |
|
58 |
Comas, D., Pääbo, S., and Bertranpetit,
J.: Heteroplasmy in the control region of human mitochondrial
DNA. Genome Res. 5: 89-90 (1995). |
|
59 |
Zischler, H., Höss, M., Handt, O., von Haeseler,
A., van der Kuyl, A.C., Goudsmit, J., and Pääbo,
S.: Detecting dinosaur DNA. Science 268: 1192- 193
(1995). |
|
60 |
Pääbo, S.: The Y chromosome and the origin
of all of us (men). (Perspective) Science 268: 1141-1142
(1995). [pdf] |
|
61 |
Sajantila, A., Lahermo, P., Anttinen, T., Lukka,
M., Sistonen, P., Savontaus, M.-L., Aula, P., Beckman,
L., Tranebjaerg, L., Gedde-Dahl, T., Issel-Tarver,
L., DiRienzo, A., and Pääbo, S.: Genes and
languages in Europe: An analysis of mitochondrial lineages.
Genome Res. 5: 42-52 (1995). [pdf] |
|
62 |
Yokobori, S.-I. and Pääbo, S.: tRNA editing
in metazoans. Nature 377: 490 (1995). |
|
63 |
Zischler, H., Geisert, H., von Haeseler, A., and
Pääbo, S.: A nuclear "fossil" of
the mitochondrial D-loop and the origin of modern humans.
Nature 378: 489-492 (1995). |
|
64 |
Sajantila, A. and Pääbo, S.: Language
replacement in Scandinavia. Nature Genet. 11: 359-360
(1995). [pdf] |
|
65 |
Petri, B., Neuweiler, G., and Pääbo, S.:
Mitochondrial diversity and heteroplasmy in two European
populations of the large mouse-eared bat, Myotis myotis.
Symp. Zool. Soc. Lond. 67: 397-403 (1995). |
|
66 |
Janke, A., Gemmell, N.J., Feldmaier-Fuchs, G., von
Haeseler, and Pääbo, S.: The mitochondrial
genome of a monotreme - the platypus (Ornithorhynchus
anatinus). J. Mol. Evol. 42: 153-159 (1996). |
|
67 |
Höss, M., Dilling, A., Currant, A., and Pääbo,
S.: Molecular phylogeny of the extinct ground sloth
Mylodon darwinii. Proc. Natl. Acad. Sci. USA 93: 181-185
(1996). |
|
68 |
Stone, A.C., Milner, G.R., Pääbo, S.,
and Stoneking, M.: Sex determination of ancient human
skeletons using DNA. Am. J. Phys. Anthropol. 99: 231-238
(1996). [pdf] |
|
69 |
Höss, M., Jaruga, P., Zastawny, T.H., Dizdaroglu,
M., and Pääbo, S.: DNA damage and DNA sequence
retrieval from ancient tissues. Nucl. Acids Res. 24:
1304-1307 (1996). [pdf] |
|
70 |
Tishkoff, S.A., Dietzsch, E., Speed, W., Pakstis,
A.J., Kidd, J.R., Cheung, K., Bonne-Tamir, B., Santachiara-Benerecetti,
A.S., Moral, P., Krings, M., Pääbo, S., Watson,
E., Risch, N., Jenkins, T., and Kidd, K.K.: Global
patterns of linkage disequilibrium at the CD4 locus
and modern human origins. [pdf] |
|
71 |
Thomas, R., Zischler, H., Pääbo, S., and
Stoneking, M.: Novel mitochondrial DNA insertion polymorphism
and its usefulness for human population studies. Human
Biol. 68: 847-854 (1996). |
|
72 |
Armour, J.A.L., Anttinen, T., May, C.A., Vega, E.E.,
Sajantila, A., Kidd, J.R., Kidd, K.K., Bertranpetit,
J., Pääbo, S., and Jeffreys, A.J.: Minisatellite
diversity supports a recent African origin for modern
humans. Nature Genet. 13: 154-160 (1996). [pdf] |
|
73 |
Handt, O., Krings, M., Ward, R.H., and Pääbo,
S.: The retrieval of ancient human DNA sequences. Am.
J. Hum. Genet. 59: 376-386 (1996). |
|
74 |
Börner, G.V., and Pääbo, S.: Evolutionary fixation of RNA editing. Nature 383: 225 (1996). |
|
75 |
Poinar, H.N., Höss, M., Bada, J.L., and Pääbo,
S.: Amino acid racemization and the preservation of
ancient DNA. Science 272: 864-866 (1996) [pdf] |
|
76 |
von Haeseler, A., Sajantila, A., and Pääbo,
S.: The genetical archaeology of the human genome.
Nature Genet. 14: 135-140 (1996). [pdf] |
|
77 |
Watson, E., Bauer, K., Aman, R., Weiss, G., von
Haeseler, A., and Pääbo, S.: mtDNA sequence
diversity in Africa. Am. J. Hum. Genet. 59: 437-444
(1996) |
|
78 |
Sajantila, A., Salem, A.-H., Savolainen, P., Bauer,
K., Gierig, C., and Pääbo, S.: Paternal and
maternal DNA lineages reveal a bottleneck in the founding
of the Finnish population. Proc. Natl. Acad. Sci. USA
93: 12035-12039 (1996). |
|
79 |
Salem, A.-H., Badr, F.M., Gaballah, M.F., and Pääbo,
S.: The genetics of traditional living: Y chromosomal
and mitochondrial lineages in the Sinai Peninsula.
Am. J. Hum. Genet. 59: 741-743 (1996). |
|
80 |
Börner, G.V., Mörl, M., Janke, A., and
Pääbo, S.: RNA editing changes the identity
of a mitochondrial tRNA in marsupials. EMBO J. 15:
5949-5957 (1996). |
|
81 |
Pääbo, S.: Mutational hot spots in the
mitochondrial microcosm. Am. J. Hum. Genet. 59: 493-496
(1996). |
|
82 |
Petri, B., von Haeseler, A., and Pääbo,
S.: Extreme sequence heteroplasmy in bat mitochondrial
DNA. Biol. Chem. 377: 661-667 (1996). [pdf] |
|
83 |
Kilger, C., Krings, M., Poinar, H., and Pääbo,
S.: "Colony sequencing": Direct sequencing
of plasmid DNA from bacterial colonies. BioTechniques
22, 412-414 (1997). |
|
84 |
Benes, V., Kilger, C., Voss, H., Pääbo,
S., and Ansorge, W.: Direct primer walking on P1 plasmid
DNA. BioTechniques 23: 98-100 (1997). |
|
85 |
Yokobori, S.-I., and Pääbo, S.: Polyadenylation
creates the discriminator nucleotide of chicken mitochondrial
tRNATyr. J. Mol. Biol. 265: 95-99 (1997). |
|
86 |
Petri, B., Pääbo, S., von Haeseler, A.
and Tautz, D.: Paternity assessment and population
subdivision in a natural population of the larger mouse-eared
bat (Myotis myotis). Mol. Ecol. 6: 235-242 (1997). |
|
87 |
Kilger, C., and Pääbo, S.: Direct exponential
amplification and sequencing (DEXAS) of genomic DNA.
Biol. Chem. 378: 99-105 (1997). |
|
88 |
Kilger, C., and Pääbo, S.: Direct DNA
sequence determination from total genomic DNA. Nucleic
Acids Res. 25: 2032-2034 (1997). |
|
89 |
Krings, M., Stone, A., Schmitz, R.W., Krainitzki,
H., Stoneking, M., and Pääbo, S.: Neandertal
DNA sequences and the origin of modern humans. Cell
90: 19-30 (1997). [pdf] |
|
90 |
Laan, M., and Pääbo, S.: Demographic history
and linkage disequilibrium in human populations. Nature
Genetics 17: 435-438 (1997).[pdf] |
|
91 |
Börner, G.V., Yokobori, S.-I., Mörl, M.,
Dörner, M., and Pääbo, S.: RNA editing
in metazoan mitochondria: Staying fit without sex.
FEBS Lett. 409: 320-324 (1997). |
|
92 |
Cooper, A., Poinar, H.N., Pääbo, S., Radovcic,
J., Debenath, A., Caparros, M., Barroso-Riuz, C., Bertranpetit,
J., Nielsen-Marsh, C., Hedges, R.E.M., and Sykes, B.:
Neandertal genetics. Science
277: 1021-1025 (1997) |
|
93 |
Gravlund, P., Meldgaard, M., Pääbo, S.,
and Arctander, P.: Polyphyletic origin of the small-bodied,
high-arctic subspecies of tundra reindeer (Rangifer
tarandus). Mol. Phylogenet. Evol. 10: 151-159 (1998). |
|
94 |
Castresana, J., Feldmaier-Fuchs, G., and Pääbo,
S.: Codon reassignment and amino acid composition in
hemichordate mitochondria. Proc. Natl. Acad. Sci. USA
95: 3703-3707 (1998). |
|
95 |
Terwilliger, J.D., Zöllner, S., Laan, M., and
Pääbo, S.: Mapping genes through the use
of linkeage disequilibrium generated by genetic drift.
Human Heredity 48: 138-154 (1998). |
|
96 |
Allen, M., Engström, A.-S., Meyer, S., Handt,
O., Saldeen, T., von Haeseler, A., Pääbo,
S., and Gyllensten, U.: Mitochondrial DNA sequencing
of shed hairs and saliva on robbery caps: sensitivity
and matching probabilities. J. For. Sci. 43(3): 453-464
(1998). |
|
97 |
Castresana, J., Feldmaier-Fuchs, G., Yokobori, S.-I.,
Satoh, N., and Pääbo, S.: The mitochondrial
genome of the hemichordate Balanoglossus carnosus and
the evolution of deuterostome mitochondria. Genetics
150(3): 1115-1123 (1998). |
|
98 |
Laan, M., and Pääbo, S.: Mapping genes
by drift-generated linkage disequilibrium. Am. J. Hum.
Genet. 63: 654-656 (1998). |
|
99 |
Poinar, H.N., Hofreiter, M., Spaulding, W.G., Martin,
P.S., Stankiewicz, B.A., Bland, H., Evershed, R.P.,
Possnert, G., and Pääbo, S.: Molecular coproscopy:
The dung and diet of the extinct ground sloth Nothrotheriops
shastensis. Science
281: 402-406 (1998). |
|
100 |
Cao, Y., Janke, A., Waddell, P.J., Westerman, M.,
Takenaka, O., Murata, S., Okada, N., Pääbo,
S., and Hasegawa, M.: Conflict among individual mitochondrial
proteins in resolving the phylogeny of eutherian orders.
J. Mol. Evol. 47: 307-322 (1998). |
|
101 |
Greenwood, A.D, and Pääbo, S.: Nuclear
insertion sequences of mitochondrial DNA predominate
in hair but not in blood of elephants. Mol. Ecol. 8:
133-137 (1999). |
|
102 |
Krings, M., Salem, A.-H., Bauer, K., Geisert, H.,
Malek, A.K., Chaix, L., Simon, C., Welsby, D., Di Rienzo,
A., Utermann, G., Sajantila, A., Pääbo, S.,
and Stoneking, M.: mtDNA analysis of Nile River Valley
populations: a genetic corridor or a barrier to migration?
Am. J. Hum. Genet. 64: 1166-1176 (1999). |
|
103 |
Kaessmann, H., Heißig, F., von Haeseler, A.,
and Pääbo, S.: DNA sequence variation in
a non-coding region of low recombination on the human
X chromosome. Nature
Genetics 22: 78-81 (1999). |
|
104 |
Krings, M., Geisert, H., Schmitz, R.W., Krainitzki,
H., and Pääbo, S.: DNA sequence of the mitochondrial
hypervariable region II from the Neandertal type specimen. Proc.
Natl. Acad. Sci. USA 96: 5581-5585 (1999). |
|
105 |
Greenwood, A.D., Capelli, C., Possnert, G., and
Pääbo, S.: Nuclear DNA sequences from Pleistocene
megafauna. Mol. Biol. Evol. 16: 1466-1473 (1999). [pdf] |
|
106 |
Pääbo, S.: Neolithic genetic engineering
(News and Views). Nature 398: 194-195 (1999). |
|
107 |
Vigilant, L., and Pääbo, S.: A chimpanzee
millenium. Biol. Chem. 380: 1353-1354 (1999). |
|
108 |
Kaessmann, H., Wiebe, V., and Pääbo, S.:
Extensive nuclear DNA sequence diversity among chimpanzees. Science
286: 1159-1162 (1999). |
|
109 |
Pääbo, S.: Human Evolution. Trends
Genet. 15(12): M13-M16 (1999). |
|
110 |
Yokobori, S.-I., Ueda, T., Feldmaier-Fuchs, G.,
Pääbo, S., Ueshima, R., Kondow, A., Nishikawa,
K., and Watanabe, K.: Complete DNA sequence of the
mitochondrial genome of the ascidian Halocynthia roretzi
(Chordata, urochordata). Genetics 153: 1851-1862 (1999). |
|
111 |
Erlandsson, R., Wilson, J.F., and Pääbo,
S.: Sex chromosomal transposable element accumulation
and male-driven substitutional evolution in humans.
Mol. Biol. Evol. 17: 804-812 (2000). [pdf] |
|
112 |
Börner, G.V., Zeviani, M., Tiranti, V., Carrara,
F., Hoffmann, S., Gerbitz, K.D., Lochmüller, H.,
Pongratz, D., Klopstock, T., Melberg, A., Holme, E.,
and Pääbo, S.: Decreased aminoacylation of
mutant tRNAs in MELAS but not in MERRF patients. Human
Mol. Genet. 9: 467-475 (2000). |
|
113 |
Pääbo, S.: Of bears, conservation genetics,
and the value of time travel (Commentary). Proc. Natl.
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Hofreiter, M., Poinar, H.N., Spaulding, W.G., Bauer,
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Ingman, M., Kaessmann, H., Pääbo, S. and
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Greenwood, A.D., Castresana, J., Feldmaier-Fuchs,
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Kaessmann, H., Wiebe, V., Weiss, G. and Pääbo,
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Pääbo, S.: The human genome and our view
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Poinar, H.N., Kuch, M., Sobolik, K.D., Barnes, I.,
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Poinar, H., Kuch, M., and Pääbo, S.: Molecular
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Hofreiter, M., Serre, D., Poinar, H.N., Kuch, M.,
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Dörner, M., Altmann, M., Pääbo, S.,
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Hofreiter, M., Jaenicke, V., Serre, D., von Haeseler,
A., and Pääbo, S.: DNA sequences from multiple
amplifications reveal artifacts induced by cytosine
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Kaessmann, H., and Pääbo, S.: The genetical
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Kaessmann, H., Zöllner, S., Gustafsson, A.,
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in small human populations in Eurasia. Submitted to American
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Hofreiter, M., Capelli, C., Krings, M., Waits, L.,
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Ebersberger, I., Metzler, D., Schwarz, C., and Pääbo,
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interspecific variation in primate gene expression
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Enard, W., Przeworski, M., Fisher, S.E., Lai, C.S.L.,
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S.: Molecular evolution of FOXP2, a gene involved in
speech and language. Nature
418: 869-872 (2002). |
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Chou, H., Hayakawa, T., Diaz, S., Krings, M., Indriati,
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acid hydroxylase occurred prior to brain expansion
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Motz, M., Sagner, G., Pääbo, S., and Kilger,
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Schmitz, R.W., Serre, D., Bonani, G., Feine, S.,
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Gilad, Y., Man, O., Pääbo, S., and Lancet,
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Pääbo, S.: The mosaic that is our genome. Nature
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Poinar, H., Kuch, M., McDonald, G., Martin, P., and
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Jaenicke-Després, V., Buckler, E., Smith,
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Thalmann, O., Hebler, J., Poinar, H.N., Pääbo,
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Serre, D., Langaney, A., Chech, M., Teschler-Nicola,
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Hofreiter, M., Rabeder, G., Jaenicke, V., Withalm,
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Ptak, S.E., Roeder, A.D., Stephens, M., Gilad, Y.,
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Enard, W., Fassbender, A., Model, F., Adorján,
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Khaitovich, P., Weiss, G., Lachmann, M., Hellmann,
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The International Chimpanzee Chromosome 22 Consortium:
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Hofreiter, M., Serre, D., Rohland, N., Rabeder, G.,
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Pääbo, S., Poinar, H., Serre, D., Jaenicke-Després,
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Fischer, A., Gilad, Y., Man, O., and Pääbo,
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Yohn, C.T., Jiang, Z., McGrath, S.D., Hayden, K.E.,
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Lineage-specific expansions of retroviral insertions
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Khaitovich, P., Hellmann, I., Enard, W., Nowick,
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Laan, M., Wiebe, V., Khusnutdinova, E., Remm, M.,
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Ptak, S.E., Hinds, D.A., Koehler, K., Nickel, B.,
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Hellmann, I., Prüfer, K., Ji, H., Zody, M.C.,
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Rohland, N., Pollack, J., Nagel, D., Beauval, C.,
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Heissig, F., Krause, J. Bryk, J., Khaitovich, P,
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Beauval, C., Maureille, B., Lacrampe-Cuyaubère,
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D., Couchoud, I., Dubrasquet, D., Laroulandie, V.,
Lenoble, A., Mallye, J.-B., Pasty, S., Primault, J.,
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Khaitovich, P., Pääbo, S., and Weiss, G.:
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Krause, J., Dear, P.H., Pollack, J., Slatkin, M., Spriggs, H., Barnes, I., Lister, A.,
Ebersberger, I., Pääbo, S., and Hofreiter, M.: Multiplex amplification of the mammoth
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Noonan, J. P., Hofreiter, M., Smith, D., Priest,
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Franz, H., Ullmann, C., Becker, A., Ryan, M., Bahn, S., Arendt, T., Simon, M., Pääbo, S., and Khaitovich, P.: Systematic analysis of gene expression in human brains before and after death. Genome Biology 6: R112 (doi:10.1186/gb-2005-6-13-r112) (2005). [pdf] |
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Fraser, H.B., Khaitovich, P., Plotkin, J.B., Pääbo, S., and Eisen, M.B.: Aging and gene expression in the primate brain. PLoS Biology 3: e274: 1653-1661 (2005). [pdf] |
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Römpler, H., Schulz, A., Pitra, C., Coop, G., Przeworski, M., Pääbo, S., and Schöneberg, T.: The rise and fall of the chemoattractant receptor GPR33. J. Biol. Chem. 280: 31068-31075 (2005). [pdf] |
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The Chimpanzee Sequencing and Analysis Consortium: Initial sequence of the chimpanzee genome and comparison with the human genome. Nature 437: 69-87 (2005). [pdf] |
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Cheng, Z., Ventura, M., She, X., Khaitovich, P., Graves, T., Osoegawa, K., Church, D., DeJong, P., Wilson, R.K., Pääbo, S., Rocchi, M., and Eichler, E.E.: A genome-wide comparison of recent chimpanzee and human segmental duplications. Nature 437: 88-93 (2005). [pdf] |
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Khaitovich, P., Tang, K., Franz, H., Kelso, J., Hellmann, I., Enard, W., Lachmann, M., and Pääbo, S.: Positive selection on gene expression in the human brain. Current Biology 16: R356-58 (2006). [pdf] |
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Somel, M., Khaitovich, P., Bahn, S., Pääbo, S., and Lachmann, M.: Gene expression becomes heterogeneous with age. Current Biology 16: R359-60 (2006). [pdf] |
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Fish, J.L., Kosodo, Y., Enard, W., Pääbo, S., and Huttner, W.B.: Aspm specifically maintains symmetric proliferative divisions of neuroepithelial cells. Proc. Natl. Acad. Sci. USA 103: 10438-10443 (2006). [pdf] |
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Prüfer, K., Muetzel, B., Do, H., Weiss, G., Khaitovich, P., Rahm, E., Pääbo, S., Lachmann, M., and Enard, W.: FUNC: a package for detecting significant associations between gene sets and ontological annotations. BMC Bioinformatics 8, doi:10.1186/1471-2105-8-41 (2007). [pdf] |
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Hublin, J.-J., and Pääbo, S.: Neandertals. Current Biology 16: R113-14 (2006). [pdf] |
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Khaitovich, P., Enard, W., Lachmann, M., and Pääbo, S.: Evolution of primate gene expression. Nature Reviews Genetics 7: 693-702 (2006). [pdf] |
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Fischer, A., Pollack, J., Thalmann, O., Nickel, B., and Pääbo, S.: Demographic history and genetic differentiation in apes. Current Biology 16: 1133-38 (2006). [pdf] |
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Stiller, M., Green, R.E., Ronan, M., Simons, J.F., Du, L., He, W., Egholm, M., Rothberg, J., Keats, S.G., Ovodov, N.D., Antipina, E.E., Baryshnikov, G.F., Kuzmin, Y.V., Vasilevski, A.A., Wuenschell, G.E., Termini, J., Hofreiter, M., Jaenicke-Després, V., and Pääbo, S.: Patterns of nucleotide misincorporations during enzymatic amplification and direct large-scale sequencing of ancient DNA. PNAS 103: 13578-84 (2006). [pdf] |
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Noonan, J.P., Coop, G., Kudaravalli, S., Smith, D., Krause, J., Alessi, J., Chen, F., Platt, D., Pääbo, S., Pritchard, J.K., and Rubin, E.M.: Sequencing and analysis of Neanderthal genomic DNA. Science 314: 1113-18 (2006). [pdf] |
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Green, R.E., Krause, J., Ptak, S.E., Briggs, A.W., Ronan, M.T., Simons, J.F., Du, L., Egholm, M., Rothberg, J.M., Paunovic, M., and Pääbo, S.: Analysis of one million base pairs of Neanderthal DNA. Nature 444: 330-36 (2006). [pdf] |
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Khaitovich, P., Kelso, J., Franz, H., Visagie, J., Giger, T., Joerchel, S., Petzold, E., Green, R.E., Lachmann, M., and Pääbo, S.: Functionality of intergenetic transcription: An evolutionary comparison. PLoS Genetics 2: 1590-1598 (2006). [pdf] |
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Prabhakar, S., Noonan, J.P., Pääbo, S., and Rubin, E.M.: Accelerated evolution of conserved noncoding sequences in humans. Science 314: 786 (2006). [pdf] |
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Stroud, J.C., Wu, Y., Bates, D.L., Han, A., Nowick, K., Pääbo, S., Tong, H., and Chen, L.: Structure of the forkhead domain of FOXP2 bound to DNA. Structure 14: 159-166 (2006). [pdf] |
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Lalueza-Fox, C., Krause, J., Caramelli, D., Catalano, G., Milani, L., Sampietro, M.L., Calafell, F., Martinez-Maza, C., Bastir, M., Garcia-Tabernero, A., de la Rasilla, M., Fortea, J., Pääbo, S., Bertranpetit, J., and Rosas, A.: Mitochondrial DNA of an Iberian Neandertal suggests a population affinity with other European Neandertals. Curr. Biol. 16: R629-30 (2006). |
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Hofreiter, M., Münzel, S., Conard, N.J., Pollack, J., Slatkin, M., Weiss, G., and Pääbo, S.: Sudden replacement of cave bear mitochondrial DNA in the late Pleistocene. Current Biology 17: R122-23 (2007). [pdf] |
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Thalmann, O., Fischer, A., Lankester, F., Pääbo, S., and Vigilant, L.: The complex evolutionary history of gorillas: Insights from genomic data. Mol. Biol. Evol. 24: 146-158 (2007). [pdf] |
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Chen, H., Green, R.E., Pääbo, S., and Slatkin, M.: The joint allele-frequency spectrum in closely related species. Genetics: doi: 0.1534/genetics.107.070730 (2007). [pdf] |
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Weber, M., Hellmann, I., Stadler, M.B., Ramos, L., Pääbo, S., Rebhan, M., and Schübeler, D.: Distribution, silencing potential and evolutionary impact of promoter DNA methylation in the human genome. Nature Genet. 39: 457-466 (2007) . [pdf] |
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Krause, J., Orlando, L., Serre, D., Viola, B., Prüfer, K., Richards, M.P., Hublin, J.-J., Hänni, C., Derevianko, A.P., and Pääbo, S.: Neanderthals in central Asia and Siberia. Nature 449: 902-904 (2007). [pdf] |
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d'Abbadie, M., Hofreiter, M., Vaisman, A., Loakes, D., Gasparutto, D., Cadet, J., Woodgate, R., Pääbo, S., and Holliger P.: Molecular breeding of polymerases for amplification of ancient DNA.
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Krause, J., Lalueza-Fox, C., Orlando, L., Enard, W., Green, R.E., Burbano, H.A., Hublin, J.-J., Bertranpetit, J., Hänni, C., Fortea, J., de la Rasilla, M., Rosas, A., and Pääbo, S.; The derived FOXP2 variant of modern humans was shared with Neandertals. Current Biology 17, doi:10.1016/j.cub.2007.10.008 (2007). [pdf] |
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Fu, N., Drinnenberg, I., Kelso, J., Wu, J.R., Pääbo, S., Zeng, R., and Khaitovich, P.: Comparison of protein and mRNA expression evolution in humans and chimpanzees. PLoS One 2 (2): e216 (2007). [pdf] |
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Albert, F.W., Shchepina, O., Winter, C., Roempler, H., Teupser, D., Palme, R., Ceglarek, U., Kratzsch, J., Sohr, R., Trut, L.N., Thiery, J., Morgenstern, R., Plyusnina, I.Z., Schoeneberg, T., and Pääbo, S.: Phenotypic differences in behavior, physiology and neurochemistry between rats selected for tameness and for defensive aggression towards humans. Hormones and Behavior 53: 413-421 (2008). [pdf] |
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Meyer, M., Briggs, A. W., Maricic, T., Höber, B., Höffner, B., Krause, J., Weihmann, A., Pääbo, S., and Hofreiter, M.: From micrograms to picograms: quantitative PCR reduces the material demands of high-throughput sequencing.
Nucleic Acids Research 36: e5 (2008). [pdf] |
203 |
Somel, M., Creely, H., Franz, H., Mueller, U., Lachmann, M., Khaitovich, P., and Pääbo, S.: Human and chimpanzee gene expression differences replicated in mice fed different diets. PLoS One 3 (1): e1504 (2008). [pdf] |
204 |
Groszer, M., Keays, D.A., Deacon, R.M.J., de Bono, J.P., Prasad-Mulcare, S., Gaub, S., Baum, M.G., French, C.A., Nicod, J., Coventry, J.A., Enard, W., Fray, W., Brown, S.D.M., Nolan, P.M., Pääbo, S., Channon, K.M., Costa, R.M., Eilers, J., Ehret, G., Rawlins, J.N.P., and Fisher, S.E.: Impaired motor learning and synaptic plasticity in mice carrying a point mutation implicated in human speech deficits. Current Biology. Hormones and Behavior 53: 413-421 (2008). [pdf] |
205 |
Hublin, J.-J., Pääbo, S., et al.: Suggested guidelines for invasive sampling of hominid remains. Journal of Human Evolution 55: 756-757 (2008).[pdf] |
206 |
Green, R.E., Malaspinas, A.-S., Krause, J., Briggs, A.W., Johnson, P.L.F., Uhler, C., Meyer, M., Good, J.M., Maricic, T., Stenzel, U., Prüfer, K., Siebauer, M., Burbano, H.A., Ronan, M., Rothberg, J.M., Egholm, M., Rudan, P., Brajković, D., Kućan, Ž., Gušić, I., Wikström, M., Laakkonen, L., Kelso, J., Slatkin, M., and Pääbo, S.: A complete Neandertal mitochondrial genome sequence determined by high-throughput sequencing. Cell 134: 416-426 (2008). [pdf] |
207 |
Krause, J., Unger, T., Noçon, A., Malaspinas, A.-S., Kolokotronis, S.-O., Stiller, M., Soibelzon, L., Spriggs, H., Dear, P.H., Briggs, A.W., Bray, S.C.E., O'Brien, S.J., Rabeder, G., Matheus, P., Cooper, A., Slatkin, M., Pääbo, S., and Hofreiter, M.: Mitochondrial genomes reveal an explosive radiation of extinct and extant bears near the Miocene-Pliocene boundary. BMC Evolutionary Biology 8: 220, doi:10.1186/1471-2148-8-220 (2008). [pdf] |
208 |
Khaitovich, P., Lockstone, H.E., Wayland, M.T., Tsang, T.M., Jayatilaka, S.D., Guo, A.J., Zhou, J., Somel, M., Harris, L.W., Holmes, E., Pääbo, S., and Bahn, S.: Metabolic changes in schizophrenia and human brain evolution. Genome Biology 9: R124, doi:10.1186/gb-2008-9-8-r124 (2008). [pdf] |
209 |
Farkas, L.M., Haffner, C., Giger, T., Khaitovich, P., Nowick, K., Birchmeier, C., Pääbo, S., and Huttner, W.B.: Insulinoma-associated 1 has a panneurogenic role and promotes the generation and expansion of basal progenitors in the developing mouse neocortex. Neuron 60: 40-55 (2008). [pdf] |
210 |
Maricic, T., and Pääbo, S.: Optimization of 454 sequencing library preparation from small amounts of DNA permits sequence determination of both DNA strands. BioTechniques 46: 51-57 (2009). [pdf] |
211 |
Somel, M., Franz, H., Yan, Z., Lorenc, A., Guo, S., Giger, T., Kelso, J., Nickel, B., Dannemann, M., Bahn, S., Webster, M.J., Weichert, C.S., Lachmann, M., Pääbo, S., and Khaitovich, P.: Transcriptional neoteny in the human brain. PNAS 106: 5743-48 (2009). [pdf] |
212 |
Albert, F.W., Carlborg, Ö., Plyusnina, I., Besnier, F., Hedwig, D., Lautenschläger, S., Lorenz, D., McIntosh, J., Neumann, C., Richter, H., Zeising, C., Kozhemyakina, R., Shchepina, O., Kratzsch, J., Trut, L., Teupser, D., Thiery, J., Schöneberg, T., Andersson, L., and Pääbo, S.:Genetic architecture of tameness in a rat model of animal domestication. Genetics 182: 541-554 (2009). [pdf] |
213 |
Enard, W., Gehre, S., Hammerschmidt, K., Hölter, S.M., Blass, T., Somel, M., Brückner, M.K., Schreiweis, C., Winter, C., Sohr, R., Becker, L., Wiebe, V., Nickel, B., Giger, T., Müller, U., Groszer, M., Adler, T., Aguilar, A., Bolle, I., Calzada-Wack, J., Dalke, C., Ehrhardt, N., Favor, J., Fuchs, H., Gailus-Durner, V., Hans, W., Hölzlwimmer, G., Javaheri, A., Kalaydjiev, S., Kallnik, M., Kling, E., Kunder, S., Moßbrugger, I., Naton, B., Racz, I., Rathkolb, B., Rozman, J., Schrewe, A., Busch, D., Graw, J., Ivandic, B., Klingenspor, M., Klopstock, T., Ollert, M., Quintanilla-Martinez, L., Schulz, H., Wolf, E., Wurst, W., Zimmer, A., Fisher, S.E., Morgenstern, R., Arendt, T., Hrabé de Angelis, M., Fischer, J., Schwarz, J., and S. Pääbo: A humanized version of Foxp2 affects cortico-basal ganglia circuits in mice. Cell 137: 961-71 (2009). [pdf] |
214 |
Ptak, S., Enard, W., Wiebe, V., Hellmann, I., Krause, J., Lachmann, M., and Pääbo, S.: Linkage disequilibrium extends across putative selected sites in FOXP2. Mol. Biol. Evol., doi:10.1093/molbev/msp143 (2009). [pdf] |
215 |
Briggs, A., Good, J.M., Green, R.E., Krause, J., Maricic, T., Stenzel, U., Lalueza-Fox, C., Rudan, P., Brajkovic, D., Kucan, Ž., Gušic, I., Schmitz, R., Doronichev, V.B., Golovanova, L.V., de la Rasilla, M., Fortea, J., Rosas, A., and Pääbo, S.: Targeted retrieval and analysis of five Neandertal mtDNA genomes. Science 325: 318-321 (2009). [pdf] |
216 |
Green, R.E., Briggs, A.W., Krause, J., Prüfer, K., Burbano, H.A., Siebauer, M., Lachmann, M., and Pääbo, S.: The Neandertal genome and ancient DNA authenticity. EMBO Journal, 28: 2494-2502 (2009). [pdf] |
217 |
Briggs, A.W., Good, J.M., Green, R.E., Krause, J., Maricic, T., Stenzel, U., and Pääbo, S.: Primer Extension Capture: Targeted Sequence Retrieval from Heavily Degraded DNA Sources. JoVE. 31.http://www.jove.com/index/details.stp?id=1573, doi: 10.3791/1573 (2009). [pdf] |
218 |
Weickert, C.S., Elashoff, M., Richards, A.B., Sinclair, D., Bahn, S., Pääbo, S., Khaitovich, P., and Webster, M.: Transcriptome analysis of male-female differences in prefrontal cortical development. Molecular Psychiatry 14: 558-561 (2009). [pdf] |
219 |
Briggs, A.W., Stenzel, U., Meyer, M., Krause, J., Kircher, M., and Pääbo, S.: Removal of deaminated cytosines and detection of in vivo methylation in ancient DNA. Nucleic Acids Research 38 (6) e87 (2010). [pdf] |
220 |
Krause, J., Briggs, A.W., Kircher, M., Maricic, T., Zwyns, N., Derevianko, A.P., and Pääbo, S.: A complete mtDNA genome of an early modern human from Kostenki, Russia. Current Biology 20: 231-236 (2010). [pdf] |
221 |
Krause, J., Fu, Q., Good, J.M., Viola, B., Shunkov, M.V., Derevianko, A.P., and Pääbo, S.: The complete mtDNA genome of an unknown hominin from Southern Siberia. Nature 464: 894-897 (2010). [pdf]
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222 |
Prüfer, K., Stenzel, U., Hofreiter, M., Pääbo, S., Kelso, J., and Green, R.E.: Computational challenges in the analysis of ancient DNA. Genome Biology 11: R47 (2010). [pdf] |
223 |
Burbano, H.A., Hodges, E., Green, R.E., Briggs, A.W., Krause, J., Meyer, M., Good, J.M., Maricic, T., Johnson, P.L.F., Xuan, Z., Rooks, M., Bhattacharjee, A., Brizuela, L., Albert, F.W., de la Rasilla, M., Fortea, J., Rosas, A., Lachmann, M., Hannon, G.J., and Pääbo, S.: Targeted investigation of the Neandertal genome by array-based sequence capture. Science 328: 723-25 (2010). [pdf] |
224 |
Addis, L., Friederici, A.D., Kotz, S.A., Sabisch, B., Barry, J., Richter, N., Ludwig, A.A., Rübsamen, R., Albert, F.W., Pääbo, S., Newbury, D.F., and Monaco, A.P.: A locus for an auditory processing deficit and language impairment in an extended pedigree maps to 12p13.31-q14.3. Genes, Brain & Behavior 9: 545-61 (2010). [pdf] |
225 |
Green, R.E., Krause, J., Briggs, A.W., Maricic, T., Stenzel, U., Kircher, M., Patterson, N., Li, H., Zhai, W., Fritz, M.H-Y., Hansen, N.F., Durand, E.Y., Malaspinas, A.-S., Jensen, J.D., Marques-Bonet, T., Alkan, C., Prüfer, K., Meyer, M., Burbano, H.A., Good, J.M., Schultz, R., Aximu-Petri, A., Butthof, A., Höber, B., Höffner, B., Siegemund, M., Weihmann, A., Nusbaum, C., Lander, E.S., Russ, C., Novod, N., Affourtit, J., Egholm, M., Verna, C., Rudan, P., Brajković, D., Kućan, Ž., Gušić, I., Doronichev, V.B., Golovanova, L.V., Lalueza-Fox, C., de la Rasilla, M., Fortea, J., Rosas, A., Schmitz, R.W., Johnson, P.L.F., Eichler, E.E., Falush, D., Birney, E., Mullikin, J.C., Slatkin, M., Nielsen, R., Kelso, J., Lachmann, M., Reich, D., and Pääbo, S.:A draft sequence of the Neandertal genome. Science 328: 710-22 (2010). [pdf] |
226 |
Giger, T., Khaitovich, P., Somel, M., Lorenc, A., Lizano, E., Harris, L., Ryan, M., Lan, M., Wayland, M., Bahn, S., and Pääbo, S.: Evolution of neuronal and endothelial transcriptomes in primates. Genome Biology and Evolution 2: 284-292 (2010). [pdf] |
227 |
Xu, A.G., He, L., Li, Z., Xu, Y., Li, M., Fu, X., Yan, Z., Yuan, Y., Menzel, C., Li, N., Somel, M., Hu, H., Chen, W., Pääbo, S., and Khaitovich, P.: Intergenic and repeat transcription in human, chimpanzee and macaque brains measured by RNA-seq. PLoS Computational Biology 6 (7): e1000843 (2010). [pdf] |
228 |
Pulvers, J.N., Bryk, J., Fish, J.L., Wilsch-Bräuninger, M., Arai, Y., Schreier, D., Naumann, R., Helppi, J., Habermann, B., Vogt, J., Nitsch, R., Tóth, A., Enard, W., Pääbo, S., and Huttner, W.B.: Mutations in mouse Aspm (abnormal spindle-like microcephaly associated) cause not only microcephaly but also major defects in the germline. PNAS 107: 16595-16600 (2010). [pdf] |
229 |
Maricic, T., Whitten, M., and Pääbo, S.: Multiplexed DNA sequence capture of mitochondrial genomes using PCR products. PLoS ONE 5 (11), e14004 (2010). [pdf] |
230 |
Reich, D., Green, R.E., Kircher, M., Krause, J., Patterson, N., Durand, E.Y., Viola, B., Briggs, A.W., Stenzel, U., Johnson, P.L.F., Maricic, T., Good, J.M., Marques-Bonet, T., Alkan, C., Fu, Q., Mallick, S., Li, H., Meyer, M., Eichler, E.E., Stoneking, M., Richards, M., Talamo, S., Shunkov, M.V., Derevianko, A.P., Hublin, J.-J., Kelso, J., Slatkin, M., and Pääbo, S.: Genetic history of an archaic hominin group from Denisova Cave in Siberia. Nature 468, 1053-1060 (2010). [pdf] |
231 |
Gralle, M., Schäfer, I., Seibel, P., and Pääbo, S.: A functional test of Neandertal and modern human mitochondrial targeting sequences. Biochem. Biophys. Res. Comm. 402: 747-749 (2010). [pdf] |
232 |
Reimers-Kipping, S., Hevers, W., Pääbo, S., and Enard, W.: Humanized Foxp2 specifically affects cortico-basal ganglia circuits. Neuroscience 175: 75-84. (2011). [pdf] |
233 |
Gralle, M., and Pääbo, S.: A comprehensive functional analysis of ancestral human signal peptides. Molecular Biology and Evolution 28: 25-28 (2011). [pdf] |
234 |
Albert, F.W., Hodges, E., Jensen, J.D., Besnier, F., Xuan, Z., Rooks, M., Bhattacharjee, A., Brizuela, L., Good, J.M., Green, R.E., Burbano, H., Plyusnina, I.Z., Trut, L., Andersson, L., Schöneberg, T., Carlborg, Ö., Hannon, G.J., and Pääbo, S.: Targeted resequencing of a genomic region influencing tameness and aggression reveals multiple signals of positive selection. Heredity, doi:10.1038/hdy.2011.4 (2011). [pdf] |
235 |
Fischer, A., Prüfer, K., Good, J.M., Halbwax, M., Wiebe, V., André, C., Atencia, R., Mugisha, L., Ptak, S.E., and Pääbo, S.: Bonobos fall within the genomic variation of chimpanzees. PLoS ONE 6(6): e21605 (2011). [pdf] |
236 |
Reich, D., Patterson, N., Kircher, M., Delfin, F., Nandineni, M.R., Pugach, I., Ko, A.M., Ko, Y., Jinam, T.A., Phipps, M.E., Saitou, N., Wollstein, A., Kayser, M., Pääbo, S., and Stoneking, M.: Denisova admixture and the first modern human dispersals into Southeast Asia and Oceania. American Journal of Human Genetics 89: 516-528 (2011). [pdf] |
237 |
Brawand, D., Soumillon, M., Necsulea, A., Julien, P., Csárdi, G. Harrigan, P., Weier, M., Liechti, A., Aximu-Petri, A., Kircher, M., Albert, F.W., Zeller, U., Khaitovich, P., Grützner, F., Bergmann, S., Nielsen, R., Pääbo, S., and Kaessmann, H.:The evolution of gene expression levels in mammalian organs. Nature 478: 343-348 (2011). [pdf] |
238 |
Nagaraj, N., Wisniewski, J.R., Geiger, T., Cox, J., Kircher, M., Kelso, J., Pääbo, S., and Mann, M.: Deep proteome and transcriptome mapping of a human cancer cell line. Molecular Systems Biology 7: 548, doi:10.1038/msb.2011.81 (2011). [pdf] |
239 |
Fu, X., Giavalisco, P., Liu, X., Catchpole, G., Fu, N., Ning, Z.B., Guo, S., Yan, Z., Somel, M., Pääbo, S., Zeng, R., Willmitzer, L., and Khaitovich, P.: Rapid metabolic evolution in human prefrontal cortex. Proc. Natl. Acad. Sci. U S A 108:6181-86 (2011). [pdf] |
240 |
Hu, H.Y., Guo, S., Xi, J., Yan, Z., Fu, N., Zhang, X., Menzel, C., Liang, H., Yang, H., Zhao, M., Zeng, R., Chen, W., Pääbo, S., and Khaitovich, P.: MicroRNA expression and regulation in human, chimpanzee, and macaque brains. PLoS Genetics 7(10):e1002327 (2011). [pdf] |
241 |
Ka, S., Albert, F.W., Denbow, D.M., Pääbo, S., Siegel, P.B., Andersson, L., and Hallböök, F.: Differentially expressed genes in hypothalamus in relation to genomic regions under selection in two chicken lines resulting from divergent selection for high or low body weight. Neurogenetics12: 211-21 (2011). [pdf] |
242 |
Liu, X., Sohmel, M., Tang, L., Yan, Z., Jiang, X., Guo, S., Yuan, Y., He, L., Oleksiak, A., Zhang, Y., Li, N., Hu, Y., Chen, W., Qiu, Z., Pääbo, S., and P. Khaitovich: Extension of cortical synaptic development distinguishes humans from chimpanzees and macaques. Genome Research, doi:10.1101/gr.127324.111. (2012). [pdf] |
243 |
Burbano, H.A., Green, R.E., Maricic, T., Lalueza-Fox, C., Rasilla, M. de la, Rosas, A., Kelso, J., Pollard, K.S., Lachmann, M., and Pääbo, S.: Analysis of human accelerated DNA regions using archaic hominin genomes. PLoS ONE 7(3) e32877 (2012). [pdf] |
244 |
Fu, Q., Rudan, P., Pääbo, S., and Krause, J.:Complete mitochondrial genomes reveal Neolithic expansion into Europe. PLoS ONE 7(3), e32473 (2012).[pdf] |
245 |
Prüfer, K., Munch, K., Hellmann, I., Akagi, K., Miller, J.R., Walenz, B., Koren, S., Sutton, G., Kodira, C., Winer, R., Knight, J.R., Mullikin, J.C., Meader, S.J., Ponting, C.P., Lunter, G., Higashino, S., Hobolth, A., Dutheil, J., Karakoҫ, E., Alkan, C., Sajjadian, S., Catacchio, C.R., Ventura, M., Marques-Bonet, T., Eichler, E.E., André, C., Atencia, R., Mugisha, L., Patterson, N., Siebauer, M., Good, J.M., Fischer, A., Ptak, S.E., Lachmann, M., Symer, D.E., Mailund, T., Schierup, M.H., Andrés, A.M., Kelso, J., and Pääbo, S.: The bonobo genome compared with the genomes of chimpanzee and human. Nature, in press (2012). |
246 |
Sawyer, S., Krause, J., Guschanski, K., Savolainen, V., and Pääbo, S.: Temporal patterns of nucleotide misincorporations and DNA fragmentation in ancient DNA. PLoS ONE 7(3) e34131 (2012). [pdf] |
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| Book Chapters |
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1
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Hellerström, C., Andersson, A.,
Björkén, C., Eriksson, U., Groth, C.G.,
Gunnarsson, R., Hardstedt, C., Lundgren, G., Peterson,
B., Pääbo, S., Swenne, I., Agren, A., and Östman,
J.: Isolation, culture and trans- plantation of human
pancreatic islets. In: Endocrinology (Eds: Cummings,
I.A., Funder, J.W., and Mendelsohn, F.A.O.), pp. 368-372
(1980). |
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2
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Kämpe, O., Larhammar, D., Wiman, K., Schenning,
L., Claesson, L., Gustafsson, K., Pääbo,
S., Hyldig-Nielsen, J.J., Rask, L., and Peterson, P.O.:
Molecular analyses of MHC antigens. In: Genetics of
the Immune Response (Eds: Möller, E. and Möller,
G.), pp. 61-87 (1983). |
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3
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Pääbo, S.: DNA is preserved in ancient
Egyptian mummies. In: Science in Egyptology (Ed: David,
A.R.), Manchester Univ. Press, pp. 383-388 (1986). |
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4
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Pääbo, S.: Amplifying ancient DNA. In:
PCR-Protocols and Applications - A Laboratory Manual
(Eds: Innis, M.A., Gelfand, D.H., Sninsky, J.J., and
White, T.J.), Academic Pres, San Diego, pp. 159-166
(1990). |
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5
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Simon, C., Pääbo, S., Kocher, T.D., and
Wilson, A.C.: Evolution of mitochondrial ribosomal
RNA in insects as shown by the polymerase chain reaction.
In: Molecular Evolution UCLA Symp. Mol. Cell. Biol.,
New Series, Vol 122, Alan R. Liss, Inc., pp. 235-244
(1990). |
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6
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Goloubinoff, P., Pääbo, S., and Wilson,
A.C.: Molecular characterization of ancient maize:
potentials and pitfalls. In: Corn and Culture in the
Prehistoric New World (Eds: Johannessen, S., and Hastorf,
C.A.), Westview Press, Boulder, CO, pp. 113-125 (1991). |
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7
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Pääbo, S. and Di Rienzo, A.: A molecular
approach to the study of Egyptian history. In: Biological
Anthropology and the Study of Ancient Egypt (Eds: Davies,
V., and Walker, R.), British Museum Press, pp. 86-90
(1993). |
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8
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Höss, M., Handt, O., and Pääbo, S.:
Recreating the past by PCR. In: The Polymerase Chain
Reaction (Eds: Mullis, K.B., Ferré, F., and
Gibbs, R.A.), Birkhauser, Boston, pp. 257-264 (1994). |
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9
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Höss, M. and Pääbo, S.: Ancient DNA.
McGraw-Hill Yearbook of Science, pp. 114-116 (1993). |
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10
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Mörl, M., Dörner, M., and Pääbo,
S.: Direct purification of tRNAs using oligonucleotides
coupled to magnetic beads. In: Advances in Biomagnetic
Separation (Eds: Uhlén, M., Hornes, E., and
Olsvik, O.), Eaton Publishing, Natick, MA, pp. 107-111
(1994). |
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11
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Pääbo, S.: Gene, Sprache und die Besiedelung
des europäischen Nordens-Zum Ursprung von Populationen
aus molekulargenetischer Sicht. In: Wie enstehen neue
Qualitäten in komplexen Systemen? (Ed: Max-Planck-Gesellschaft),
Vandenhoeck & Ruprecht, Göttingen, pp. 49-56
(2000). |
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12
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Poinar, H.N. and Pääbo, S.: DNA. In: Palaeobiology
II (Eds: Briggs, D.E.G. and Crowther, P.R.), Blackwell
Science, Oxford, pp. 241-245 (2001). |
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13
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Pääbo, S.: Die Wurzeln der Menschheit – die Evolution des humanen Genoms. In: Die Architektur des Lebens – über Gene, Organismen und Personen (Eds: Lessl, M., and Stock, G.), Springer, Berlin, Heidelberg, pp. 39-72 (2002). [pdf] |
14 |
Rabeder, G., Hofreiter, M., Nagel, D., Pääbo, S., and Withalm, G.: Die neue Taxonomy der Höhlenbären. In: Cave bear researches, Abhandlungen zur Karst- und Höhlenkunde, Heft 34 (Eds. Rosendahl, W., Morgan, M., and Correa, M. L. (2002). |
15
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Pääbo, S.: Ancient DNA. In: DNA - Changing
Science and Society. (Ed: Krude, T.), Cambridge University
Press, Cambridge, pp. 68-87 (2004). |
16
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Pääbo, S.: Was ist Forschung? In: Entwurfsatlas
Forschungs- und Technologiebau (Eds: Braun, H., and
Grömling, D.), Birkhäuser, Basel-Berlin-Boston,
pp. 10f (2005). [pdf] |
17 |
Serre, D., Schmitz, R.W., and Pääbo, S.: Genetic analyses of the Neanderthals from the Feldhofer Caves . In: Rheinische Ausgrabungen, Band 58: Neanderthal 1856-2006 (Ed: R.W. Schmitz), Verlag Philipp von Zabern, Mainz am Rhein, pp. 329-333 (2006). |
18 |
Serre, D., Langaney, A., Chech, M., Teschler-Nicola, M., Paunovic, M., Mennecier, P., Hofreiter, M., Possnert, G., and Pääbo, S.: No evidence of Neanderthal mtDNA contribution to early modern humans. In: Early modern humans and the Moravian Gate (Ed: Teschler-Nicola, M.), Springer Verlag, Wien, pp. 491-504 (2006). |
19 |
Serre, D., and Pääbo, S.: The fate of European Neanderthals: results and perspectives from ancient DNA analyses. In: Neanderthals revisited. (Eds.) K. Harvati and T. Harrison, Springer, Dordrecht, The Netherlands, 211-219 (2006). |
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| Book Reviews |
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1
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Pääbo, S.: The mummy of
Ramses II reconsidered. Orientalistische Literatur-
Zeitung 83(4): 389-394 (1988) |
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2
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Pääbo, S.: Molecular systematics at
the crossroads. Trends in Genetics 7: 272 (1991) |
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3
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Pääbo, S.: Molecular Anthropology? Trends
in Genetics 9: 255 (1993) [pdf] |
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4
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Pääbo, S.: A revolution in evolution.
Nature 386:456 (1997) [pdf] |
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| Patents and Patent Applications |
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| Pääbo, S., and Kilger, C.: Method for the direct,
exponential amplification and sequencing of DNA molecules
and its application. European patent: EP 1 004 677; US
application: 991347, 311723, 33104; Japanese application:
9-351817. |
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| Pääbo, S., and Kilger, C.: Method for the uncoupled,
direct, exponential amplification and sequencing of DNA
molecules with the addition of a second thermostable DNA
polymerase and its application. European patent: EP 0 854
196; US applications: 08/991184, 357166, 339103; Japanese
application: 9-353367. |
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Print version (pdf) |
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Updated 2012-04-26 vm
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